Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRGRA-------------------------------DDTDDVILNRMKVYRDETAPLLEYYRD--QLKTVDAVGTMDEVFARALRALGK
4QBG Chain:B ((1-213))
MNIVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRKLEHVIHIEVRQEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVAKRLEVNMKQMAPLLAFYDSKEVLRNVNGQQDMEKVFKDLRELLQ-
General information:
TITO was launched using:
RESULT:
Template:
4QBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72636 for 1372 contacts (-52.9/contact) +
2D Compatibility (PS) -20151 + (NN) -14486 + (LL) 64
1D Compatibility (HY) -17600 + (ID) 4000
Total energy: -128809.0 ( -93.88 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_4QBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBG-query.scw
PDB file :
Tito_Scwrl_4QBG.pdb
: