Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA-NGGGDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQG-LARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPD-FEVAESR--IVWSG-GSYVRRPLSVPFRVTS |
| 4MM0 Chain:A ((11-399)) | -------HPYPFDRAVPTAIPPLYEELRETERVAAITMA--TGDPGFLVTRYEDVRFVLSDPR-FSVRQD-LPGA-P--RLTEMTFESVMTTDPPVHTRLRRLLSRDFTARRIERMRPRLEEIAEGLLDEMEKKGAPADIVESLAVPFPITVICELLGVPMVDVARFRGWADTMVSLTG-YSM-EDWTAARDALESYLDGLVAAKRENPGSDLLSALVATAA--EDNELTDHDVRSLSLILLLAGYEPASNQLGSSVLTLLRFPDRLAELRRDPGLLPSAVEELMRYAPAGDGALFRVTLEDVTIGDTHIPANSAVLASTQAANWDPRRF-DDPTGLRLDRPDNQHTALGHGIHFCLGAALARVELQVAIGALLRRF-PRLALATDESGLRWSSPGSMLSGFAEIPVTW-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199428 for 3173 contacts (-62.9/contact) +
2D Compatibility (PS) -41122 + (NN) -19469 + (LL) 1132
1D Compatibility (HY) -20400 + (ID) 5850
Total energy: -285137.0 ( -89.86 by residue)
QMean score : 0.449
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