Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGPAWRDAADVVVIGTGVAGLAAALAADRAGRSVVVLSKAAQTHVTATHYAQGGIAVVLPDNDDSVDAHVADTLAAGAGLCDPDAVYSIVADGYRAVTDLVGAGARLDESVPGRWALTREGGHSRRRIVHAGGDATGAEVQRALQDAAGML--DIRTGHVALRVLHDGTAVTGL-LVVRPDGCGIISAPSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGRAGGRRPLITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLKATGDPCVYLDARGIEGFASRFPTVTASCRAAGIDPVRQPIPVVPGAHYSCGGIVTDVYGQTELLGLYAAGEVARTGLHGANRLASNSLLEGLVVGGRAGKAAAAHAAAAGRSRATSSATWPEPISYTALDRGDLQRAMSRDASMYRAAAGLHRLCDSLSGAQVRDVACRRDFEDVALTLVAQSVTAAALARTESRGCHHRAEYPCTVPEQARSIVVRGADDANAVCVQALVAVC |
2E5V Chain:A ((1-468)) | ----------MIYIIGSGIAGLSAGVALRRAGKKVTLISKRI--DGGSTPIAKGGVAASVGS-DDSPELHAQDTIRVGDGLCDVKTVNYVTSEAKNVIETFESWGFEFEEDL-R-----LEGGHTKRRVLHR-TDETGREIFNFLLKLAREEGIPIIED-RLVEIRVKDGKVTGFVTEK-RG--LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE---VFLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKG--HKVFIDLSKIEDFERKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSSWEGISTDDGIVHS-VR-ISGNKTLSLKEIRRINWENVGIIRNEEKLVKAINTYSSST------------QNEAIISYLTALAAEIRKESRGNHFREDYPYKDPNWEKRIYF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298678 for 4332 contacts (-68.9/contact) +
2D Compatibility (PS) -49291 + (NN) -15176 + (LL) 3336
1D Compatibility (HY) -24000 + (ID) 7450
Total energy: -391259.0 ( -90.32 by residue)
QMean score : 0.474
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