Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDG-TGGPGYQFANEYPTDQYSANDPKLNEPVIYPRGTLAMANA-GPNTNSSQFFMVYRDS-KLPP-----QYTVFGTIQADGLTTLDKIAKAGVAG-GGEDGKPATEVTITSVLLD |
1V9T Chain:A ((3-164)) | ------------------------------------------------------------------------------------------------------------------------------------------GDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIP---GFMIQGGGFTEQMQQKKPNPPIKNEADN------------GLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVK-GMDVADKISQVPTHDVGPYQNVPSKPVVILSATV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86403 for 1253 contacts (-69.0/contact) +
2D Compatibility (PS) -16686 + (NN) -12578 + (LL) 8012
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -118005.0 ( -94.18 by residue)
QMean score : 0.462
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