Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPIQAPDGGQGWPAAALGPAQRAVAWKRLGTEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARD-LASGTSSRSSKMFHGGLRYLEQL-EFGLVREALYEREL-SLTTLAPHLVKPLPFLFPLTKRWWERPYIAAGIFLYDRL-GGAKSVPAQRHFTRAGALRLSPGLKRSSLIGGIRYY-DTVVDDARHTMTVARTAAHYGAVVRCSTQVVALLREGDRVIGVGVRDSENGAVAEVRGHVVVNATGVWTDEIQALSKQRGRFQVRASKGVHVVVPRDR-IVSDVA-MILRTE-KSVMFVIPW-GSHWIIGTTDTDWNLDLAHPAATKADIDYILGTVNAVLATPLTHADIDGVYAGLRPLLAGESDDTSKLSREHAVAVPAAGLVAIAGG---KYTTYRVMAADAIDAAVQFIPARVAPSITEKVSLLGADGYFALVNQAEHVGALQGLHPYRVRHLLDRYGSLISDVLAMAASDPSLLSPITEAPGYLKVEAAYAAAAEGALHLEDILARRMRISIEYPHRGVDCAREVAEVVAPVLGWTAADIDREVANYMARVEAEVLSQAQPDDVSADMLRASAPEARAEILEPVPLD |
| 4X9M Chain:A ((35-416)) | --------------------------------METRDVLIVGGGVIGCATAYELSQYKLKVTLVEKHHYLAQETSHANSGVIHTGIDPNPHKLTAKYNILGKKLWLNTYF-KRLGFPRQKIRTLIVAFNEM-EREQL---EVLKQRGIANQINLEDIQMLSKEETLKLEPYVNPE-IVAGLKIEGSWAIDPVLASKCLALAAQQNKVQICTNTEVTNISKQVDGTYLVWTN---NETTPSFKVKKIIDAAGHYADYLAHLAKA-DDFEQTTRRGQYVVVTNQGELHLNSMVFMVPTIHGKGVIVSPMLDGNFLVGPTALDGVDKEATRYITKDAPCMLTKIGKHMV-PSLNINNALISFAGSRPIDKATN---DFIIRVAH---NDPDFVILGGMKSPGLTAAPAIVREAVRLLNWKLTK--KPNWNGKYNLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187426 for 3244 contacts (-57.8/contact) +
2D Compatibility (PS) -38752 + (NN) -161 + (LL) 15424
1D Compatibility (HY) -10400 + (ID) 3550
Total energy: -224865.0 ( -69.32 by residue)
QMean score : 0.368
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