Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTAR---SPLVG-------GEFVDLTDAYSPRLRELARQSD------PQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITG--EPLSHAEVLAAGAASATRMGALLADVIARF |
| 3FUC Chain:A ((3-282)) | ----NGYTYEDYQDTAKWLLSHTE-QRPQVAVICGSGLGGLVNKLTQA-QTFDYSEIPNFP--------GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMASI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169739 for 2184 contacts (-77.7/contact) +
2D Compatibility (PS) -27312 + (NN) -4457 + (LL) 468
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -225390.0 ( -103.20 by residue)
QMean score : 0.758
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