Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGGTWDLFRYPGIRSDSDMYTLGFRFRP----W-TGRQAIADGKPILEYVKSTAAMYGIDRHIRFHHKVISADWSTAENRWTVHIQSHGTLSALTCEFLFLCSGYYNYDEGYSPRFAGSEDFVGPIIHPQHWPEDL-------DYDAKNIVVIGSGATAVTLVPALADSGAKHVTMLQRSPTYIVSQPDRDGIAE---KLNRWLPETMAYT------A-----VRWK--------NVLRQAA---------VYSACQ-----KWPRRMRKMFLSLIQRQLPEGYDVRKHFGP-HYNPWDQRLCLVPNGDLFRAIRHGKVEVVT---DTIERFTATGIRLNSGRELPADIIITATGLNLQLFG--GATAT-IDGQQVD--IT-TTMAYKGMMLSGIPNMAYTVGYTNA----SWTLKADLVSEFVCRLLNYMDDNGFDTVVVERPGSDVEERPFMEFTPGYVLRSLDELPKQGSRTPWRLNQNYLRDIRLIRRGKIDDEGLRFAKRPAPVGV |
| 3UOX Chain:A ((7-477)) | -SPALDAVVIGAGVTGIYQAFLINQAG--MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE---EVVTCRFLISATGPL--SA---PDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVK-DPVVAEKLIPKDHPFGAKRVP--METNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDNGFTYSEPTQA------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -271840 for 3244 contacts (-83.8/contact) +
2D Compatibility (PS) -42825 + (NN) -11195 + (LL) 3884
1D Compatibility (HY) -21600 + (ID) 5150
Total energy: -348726.0 ( -107.50 by residue)
QMean score : 0.430
|
|
|