Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPPIDDPFGTPAGGGNGSPPDDRTMIMPRPGGRAPEPAGGPRGGDPYTPPPMASLAPLSGR----GDGLNPLEQAAGPLLAMLTRLRNTIAHPAPASLRA---------QLLGYLRQFEE--KARQAGVAPDE-----VMLARYVLCTALDEAVLSTPWG-STSDWGKQSLLITLHNEAWGGEKVFQLLEHCLQNPHQRLHLLELLYLCTSLGF----EGRYRVMHDGRSQLEA-----LRERTAAVIRSTRGEYEHELSPHWRGLSVMRDRLSQYLPPWVGIAIGLALLLALLFGLRMKL----------------AADAEPVFKRIHAIGEIPVQAID------RPAVQPRVIERPRLARFLAD--DIKAQRVAVEDAVD------RSVVTIRGDELFASASASVRDEFQPLLLRIADAL----------RKVKGQVLVTGHSDNRPIAT-----LRY------PSNWKLSQARAQEVA--DLLGATTG---------DAGRFTAEGRSDTEPVATNASA-----EGRARNRRVEI-TVFAEGAQ |
| 2BVL Chain:A ((1-543)) | MSLVNRKQLEKMANVRFRTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDICIDTYKKSGRNKALKKFKEYLVTEVLELKNNNLTPVEKNLHFVWIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDELNTYIEESLNKITQNSGNDVRNFGEFKNGESFNLYEQELVERWN-LAAASDILRISALKEIG---GMYLDVDMLPGIQPDLFESIEKPSSVTVDFWEMTKLEAIMKYKEYIPEYTSEHFDMLDEEVQSSFESVLASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVKDSYCSNLIVKQIENRYKILNNSLNPAISEDNDFNTTTNTFIDSIMAEANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKRNYFEGAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77066 for 3223 contacts (-23.9/contact) +
2D Compatibility (PS) -47105 + (NN) -11174 + (LL) 380
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -155565.0 ( -48.27 by residue)
QMean score : 0.218
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