Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAPVEALFQPFRLGALELPTRVVMAPMTRNFSP--GGVPNAKVVEYYRRRAAAGVGLIVSEGTTVGHKAANGYPNVPRFYGEDALAGWKQVVDAVHAEGGRIVPQLWHVGSVRRLGVEPDASVPGYGPMEKAKD-GKVLVHGMSKADIQEVIAAFAQAARDAQAIGMDGVEIHGAHGYLIDQFFWEGSNQRDDEYGGSLANRSRFAVELVRAVRAAVGADFPIIFRFSQWKQQDYSARLVETPEGLREFLAPLVEAGVDIFHCSTRRFWIPE-FEGSELN--LAGWTRELTGKPTITVGNVGLDGSEFLQFFGKTDEVAQPASIDGLVERLDKGEFDLVAVGRALLVDPEWAVKVREGRIGDIKPFSREALASLV |
3GR7 Chain:A ((1-329)) | ---MNTMLFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQG-RISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPG-----EI-IAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW--DGPLFVRISASDY--HPDGL--TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSG------------WQAE--------EILQNGRADLVFLGRELLRNPYWPYAAARELGAKISAPVQYERGWRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157356 for 2961 contacts (-53.1/contact) +
2D Compatibility (PS) -35416 + (NN) -13530 + (LL) 1376
1D Compatibility (HY) -14000 + (ID) 5250
Total energy: -224176.0 ( -75.71 by residue)
QMean score : 0.565
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