Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRSPLFSQFPLHERLLKALESLSFSEPTPVQAAAIPKALE--GHDLRVTAQTGSGKTAAFLLPLLHRLLAEDK-PRSLARALILLPTRELAQQTLKEVERFAQFT-FI---KACLITGGEDFKVQ-GARLRKNPEIIIGTPGRLLEQRNAG-NLPLQDIEVLVLDEADRMLDMGFADDVLALANACP-------AERQTLLFSATHSGAGLNKVIAEVLREPQVLRLNQV----GELNENVRQQVITADDV-AH----KEQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIAN---QHKVFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
3I5X Chain:A ((78-458)) | ----------VLDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDD-KVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELE---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172090 for 2977 contacts (-57.8/contact) +
2D Compatibility (PS) -39216 + (NN) -26951 + (LL) 5144
1D Compatibility (HY) -28000 + (ID) 5650
Total energy: -266763.0 ( -89.61 by residue)
QMean score : 0.545
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