Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEAFLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLM-YEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
| 1NUW Chain:A ((10-333)) | --IVTLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVE-PEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNST-----DEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPP--DNSAPYGARYVGSMVADVHRTLVYGGIFMYPANK--KSPKGKLRLLYECNPMA-YVMEKAGGLATTGKEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173524 for 2832 contacts (-61.3/contact) +
2D Compatibility (PS) -35108 + (NN) -21200 + (LL) 344
1D Compatibility (HY) -28400 + (ID) 5950
Total energy: -263838.0 ( -93.16 by residue)
QMean score : 0.496
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