Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQATCARIARRFVWRNRMPRRLFIGLFLLPLPLFAAPPKDELAYAVGARLGMRLQQEMPGLELSELLLGLRQAYRGEALEIPPERIEQLLLQHENATTETPRTTPAEARFLANEKARFGVRELTGGVLVSELRRGQGN-GIGAATQVHVRYRGLLADGQVFDQSES---AEWFALDSVIEGWRTALRAMPVGARWRVVIPSAQAYGHEGAGDLIPPDAPLVFEIDLLGFR |
1JVW Chain:A ((42-171)) | -----------------------------------------------------------------------------------------------------NYRKRVGRLFMEQKAAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65994 for 949 contacts (-69.5/contact) +
2D Compatibility (PS) -13991 + (NN) -6039 + (LL) 8920
1D Compatibility (HY) -9600 + (ID) 2150
Total energy: -88854.0 ( -93.63 by residue)
QMean score : 0.487
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