Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNRGVVYLGPG-KVEVQNIPYPKMQDPQGRQIDHGVILRVVSTNICGSDQHMVRGRTTAPEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPAR-------------------AGGAYGYVDMGGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQGFEIADLSKDT--PLHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQQEAPATVLNSLMGITRVA-GKIGIPGLYVTEDPGAVDAAAKHGALSIRFGLGWAKSHSFHTGQ---TPVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGVPKKFVIDPHNLFRAA |
| 1E3I Chain:A ((6-375)) | VIKCKAAIAWKTGSPLCIEEIEVSPPK-A------CEVRIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHF----MGVSSFSQYTVVSEA--NLARVDDEAN----LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTA-GGVDYSLDCAGTAQ---------------TLKAAVDCTVLGWGSCTVVGAKVDEM-------------TIPTVDVI-LGRSINGTFFGGWKSVDSVPNLVSDYKNKKFD-LDLLVTHALPFESINDAIDLMKEGKSIRTILT-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216558 for 3122 contacts (-69.4/contact) +
2D Compatibility (PS) -35980 + (NN) -5327 + (LL) 2716
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -275799.0 ( -88.34 by residue)
QMean score : 0.576
|
|
|