Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGLSGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARKYKL---------PIYA--NAKTWKAMDNMIGEVSSDQKFQFDMETVKNFGSMQVESFGVSHDAIEPM---------FYIFHKG------NKKFVMITDTGYVSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEVITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI |
| 1WW1 Chain:A ((1-280)) | ----------------MNIIGFSKALFSTWIYYSPERILFDAG------EGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNRAVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKSEVSFGYHIFEVRRKFVTEEYHKKVLTISGDSLALDPEEIRGTELLIHECTFLDAR-----------------DNHAAIDEVMESVKAA---GVKKVILYHISTRY-------IRQLKSVIKKYREEMPDVEILYMDPRKVFEM--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83117 for 1813 contacts (-45.8/contact) +
2D Compatibility (PS) -23729 + (NN) -4544 + (LL) 4016
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -120574.0 ( -66.51 by residue)
QMean score : 0.367
|
|
|