Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGL-PAPRGFRAAFAAAYAVAYLAGGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGEGVGPAAAIYGSGSMFVQEEPEHLRRRKLLTPPLHGAALDRYVPIIENSTRAAMHTWPVDRPFAMLTVARSLMLDVIVKVIFGVDDPE-EVRRLGRPFERLLNLGVSEQLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGESGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGG------------GEAFTTAVINETLRVRPPAPLTARVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRP---QTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPERIVRRSIMLVPRRGTRVRFRPAR |
| 3DBG Chain:A ((22-438)) | -------------------------------------REPPVAGGGVPLLGHGWR-------LARDPLAFMSQ-LRDHGDVVRIKL-GPKTVYAVTNPELTGALALNPDY-------------------------------RRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRG-------------------------DALADLHLLVDEIIAERRASG--QKPDDLLTALLEA--------GEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAG-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213551 for 2680 contacts (-79.7/contact) +
2D Compatibility (PS) -36627 + (NN) -21284 + (LL) 11016
1D Compatibility (HY) -13600 + (ID) 4300
Total energy: -278346.0 ( -103.86 by residue)
QMean score : 0.437
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