Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDYTKIEKIGEGTYGVVYKGRHKTTGQVVAMKKIRLESEEEGVPSTAIREISLLKELRHPNIVSLQDVLMQ-DSRLYLIFEFLSMDLKKYLDSI-PPGQYMDSSLVKSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDD-KGTIKLADFGLARAFGIPIRVYTHEVVTLWYRSPEVLLGSARYSTPVDIWSIGTIFAELATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKN-TFPKWKPGSLASHVKN-LDENGLDLLSKMLIYDPAKRISGKMALNHPYFNDLDNQIKKM |
3EB0 Chain:A ((7-329)) | -KKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDYFYTTNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN--PHY--VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSIPQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159677 for 2147 contacts (-74.4/contact) +
2D Compatibility (PS) -29763 + (NN) -11296 + (LL) 788
1D Compatibility (HY) -29600 + (ID) 4800
Total energy: -234348.0 ( -109.15 by residue)
QMean score : 0.508
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