Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFTLPELPYDKTALEPYISAKTLDFHYDKHHKGYLNKLNELIENTDYQNVKIEELIMKVHGNSDEVPVFNNAAQVWNHTFYWNSMKKSGGDKPKEDGLLAKKIQDDIGGFDKFHEEFFNHGIGQFGSGWVWLVLE-RGKLKITKTPNADLPLIYDQVPLLTMDVWEHAYYLDCQNRRIDYIKIFLDHLINWDFAEENLKKNT
1DT0 Chain:A ((1-194))
-AFELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEFEGKTLEEIVKT-----SSGGIFNNAAQVWNHTFYWNCLSPNAGGQPT--GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPLTIGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFW-NLVNWAFVAEQFEGKT
General information:
TITO was launched using:
RESULT:
Template:
1DT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107889 for 1570 contacts (-68.7/contact) +
2D Compatibility (PS) -19946 + (NN) -3950 + (LL) 116
1D Compatibility (HY) -18800 + (ID) 4650
Total energy: -155119.0 ( -98.80 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1DT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DT0-query.scw
PDB file :
Tito_Scwrl_1DT0.pdb
: