Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKEIRNLKIASVLRRAISKVLMEGKVFNK-----NVVISDVKLSGDLKKADVYIVLSSLSKKKYN-INTVVDEINQSAWLIRKSILSYVDLRFIPKLVFKADLAFDNFVNISKILSNYT
2KZF Chain:A ((2-106))
MNPAYRKAMLESEIQKLLMEALQ-Q-LRDPRLKKDFVTFSRVELSKDKRYADVYVSFLG----TPEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVK---------
General information:
TITO was launched using:
RESULT:
Template:
2KZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71116 for 612 contacts (-116.2/contact) +
2D Compatibility (PS) -10299 + (NN) -192 + (LL) 1100
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -85257.0 ( -139.31 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2KZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KZF-query.scw
PDB file :
Tito_Scwrl_2KZF.pdb
: