Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERG--IKVNLIEMRPVKQTPAHHTDKFAELVCSNS----LRGNALTNGVGVLKEEM--RRLNSIIIEAADKARV--PAGGALAVDRHDFSGYITETLKNHENITVINEE-------INAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL |
| 3C4A Chain:A ((1-150)) | --MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVL-----GWGVVLPGRPGQHPANPLSY---LDAP-ERLNPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGELPLADYDLVVLANGVNHK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39216 for 846 contacts (-46.4/contact) +
2D Compatibility (PS) -13728 + (NN) -3091 + (LL) 20548
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -42837.0 ( -50.63 by residue)
QMean score : 0.350
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