Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAEKWYDANFDQDLINERARAKDICFELNHTKPSDTNKRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFYHRNEGYEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDNDLPSETLNDETIK
3SRT Chain:A ((4-187))
MTEKEKMLSGKGYYA-NDELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIE--------------
General information:
TITO was launched using:
RESULT:
Template:
3SRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97293 for 1438 contacts (-67.7/contact) +
2D Compatibility (PS) -20366 + (NN) -12187 + (LL) 372
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -151774.0 ( -105.55 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3SRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SRT-query.scw
PDB file :
Tito_Scwrl_3SRT.pdb
: