Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTIKDIHALEVMDSRGNPTIQASVILSDNTKASAIVPSGA-STGKREALELRDNDKTRFLGKGVLRACENVNSVIKHHLIG--LEATNQAFVDERLRALDGTPNYANLGANAVLGVSMALARASAKALNLPLYRYLGGAN-----ALTLPVPMLNIINGGTHANNSIDFQEYMIMPLGFESFKEALRASAEVYHTLKKLLDEK-N-QLTSVGDEGGFAPNFNNNVEPLEIISQAIEKAGYKLGEEIALALDVASSELVDEHFNYHLKG------ENKILDSHELVAYYKELVAKYPIVSIEDGLSEDDWEGWAFLSKELGRQIQLVGDDLFVTNASILQKGIEKNVANAILIKPNQIGTISETLETIRLAKHHAYQCVISHRSGESEDSFIADFAVALNTGEIKTGSTARSERIAKYNRLLEIEHELKGG-IYIGKELFKHG |
| 2AL1 Chain:A ((1-433)) | --AVSKVYARSVYDSRGNPTVEVELTTEKGV-F-RSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGH--DGKVKIGLDCASSEFFKD-GKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTA--GIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGEN-FHHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176317 for 3965 contacts (-44.5/contact) +
2D Compatibility (PS) -45427 + (NN) -21952 + (LL) 808
1D Compatibility (HY) -34400 + (ID) 9600
Total energy: -286888.0 ( -72.36 by residue)
QMean score : 0.563
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