Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNA---FLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLE-NI--DLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQIL--------NQKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL
1O5X Chain:A ((3-247))
RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKT--IEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLKE-SFVDIIKSA
General information:
TITO was launched using:
RESULT:
Template:
1O5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121105 for 1896 contacts (-63.9/contact) +
2D Compatibility (PS) -24591 + (NN) -6210 + (LL) 440
1D Compatibility (HY) -11600 + (ID) 3600
Total energy: -166666.0 ( -87.90 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1O5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5X-query.scw
PDB file :
Tito_Scwrl_1O5X.pdb
: