Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLIINGAKAFGHSGGKLNETLTHHAKKILESL--GLEVDTTIVDKG------------------------------YEKSQEVEKFFSADATIWQMPGWWMGEPWIVKKYIDEVFTSGHGKLYASDGRSSQNPTKNYGKGGLMQGKKYMLSLTWNAPIEAFNDPSEFFEGVGVDVVYLHLHKAFQFLGLSALPTFICNDVMKN-PQVEQYLNSLTVHLRQAFGK |
| 3W77 Chain:A ((2-206)) | -ATVLFVKANNRPA--EQAVSVKLYEAFLANYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPE-----------GPVGLIGDKKIALLNARGGVYSEGPA-------AEVEMAVKYVASMMGFFGATNMETVIIEGHNQFPDKAEEIIAAGLEEAAKVASK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75927 for 1322 contacts (-57.4/contact) +
2D Compatibility (PS) -19037 + (NN) -9744 + (LL) 256
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -112252.0 ( -84.91 by residue)
QMean score : 0.539
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