Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKIAKTAIISPKAEIGKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFIGKNTEIFPFAVLGTQPQDLKYKGEYSELMVGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYCTVEGNRAFIRGLNRHRMRQLLESKDIDFIHALYKRLFRPIPSLRESAKLELEEHANNPFVKEICSFILESSRGVAYKSSEYSSEEKQEE
3R0S Chain:A ((6-261))
--KIHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYK---SGVVIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTLFRQG-DLKENAKNLLENQ-ESENVKKMCHFILETKRGIPVYR-----------
General information:
TITO was launched using:
RESULT:
Template:
3R0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -243289 for 2242 contacts (-108.5/contact) +
2D Compatibility (PS) -27303 + (NN) -6827 + (LL) 920
1D Compatibility (HY) -22800 + (ID) 5400
Total energy: -304699.0 ( -135.90 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3R0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R0S-query.scw
PDB file :
Tito_Scwrl_3R0S.pdb
: