Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMMQLATKSFKNVECVAFEGLLADLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPFISKV
3K9W Chain:A ((21-176))
SMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSRAKKPFFSLEERLKIANEVLGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEK
General information:
TITO was launched using:
RESULT:
Template:
3K9W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124155 for 1205 contacts (-103.0/contact) +
2D Compatibility (PS) -16571 + (NN) -3078 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 3400
Total energy: -162404.0 ( -134.78 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3K9W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K9W-query.scw
PDB file :
Tito_Scwrl_3K9W.pdb
: