Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEKERFRTELIGEKIGQLCKTYQFTYGYRKIAALMKQEEQ--VGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQTQN
1B4A Chain:A ((5-54))
---------QRHIKIREIIMS-NDIETQDELVDRLRE-AGFNVTQATVSRDIKEMQLVKVP-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31198 for 271 contacts (-115.1/contact) +
2D Compatibility (PS) -5031 + (NN) -395 + (LL) 5356
1D Compatibility (HY) 0 + (ID) 300
Total energy: -31568.0 ( -116.49 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1B4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B4A-query.scw
PDB file :
Tito_Scwrl_1B4A.pdb
: