Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDWKLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPET--TRFGTYAEYTAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTLAIQLAKHAGAEVITTASAKNHELLKSLGADQVIDYKEV-NFKDVL---SDIDVVFDTMGGQIETDSYDVLKEGTGRLVSIVGISNED--RAKEKNVTATGIW----------LQPNGEQLKELGKLLANKTIKPI-VGATFPFSEKGVFDAHALSETH----HAVGKIVISFNK |
| 3GAZ Chain:A ((8-336)) | MIAAVVEEANG--PFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKR-FGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAE--IGSAYDAVLGRNDVPRQRGKIAITVE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139027 for 2823 contacts (-49.2/contact) +
2D Compatibility (PS) -32838 + (NN) -5450 + (LL) 160
1D Compatibility (HY) -18800 + (ID) 5250
Total energy: -201205.0 ( -71.27 by residue)
QMean score : 0.551
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