Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEMTLAFIEEQYKELDNLNNKE-NPAVLTRNTSTGELFVRKIIPSSF---------------APVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGK-NLADLMKTNAPFDTDEVTRLMLMLSDALTELHANAIIHRDIKPSNIMISSDGVLKLIDFDASRMFEVGKNQDTVNLGTIGYAAPEQYGYSQT-DARSDIYSIGVLMLELLLGKNTLPDKEH------------ATSLEKIAMQAGAFDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIPWYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFVIFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS |
| 3DLS Chain:A ((23-274)) | ---------SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRT-TLEKLVT--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86889 for 1641 contacts (-52.9/contact) +
2D Compatibility (PS) -24536 + (NN) -17414 + (LL) 9808
1D Compatibility (HY) -14800 + (ID) 2550
Total energy: -136381.0 ( -83.11 by residue)
QMean score : 0.606
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