Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MIKLTNVVKKF--GKIEAVKGINLEVEKGSLFAFLGENGAGKSTTLSMICTESEPTSGEIYIDDEKLTFKNRKLFRQK---LGVVFQENVLDDLLTVRENLYNRASLYGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEPTTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEAKD-ADQLAVIHKGKIIAQGTPTNIR----SRFSVDKI---FFYDAKVAELQKIMKKANLPFKVSKATMRVDVITQDVEI-------------LAILNQAAGLYGSFEVIKGNLDDAFISMIKEESDD---------------------
1OXS Chain:C ((1-352))MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK


General information:
TITO was launched using:
RESULT:

Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127298 for 2343 contacts (-54.3/contact) +
2D Compatibility (PS) -32249 + (NN) -3015 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 4500
Total energy: -184662.0 ( -78.81 by residue)
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_1OXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXS-query.scw
PDB file : Tito_Scwrl_1OXS.pdb: