Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIKLTNVVKKF--GKIEAVKGINLEVEKGSLFAFLGENGAGKSTTLSMICTESEPTSGEIYIDDEKLTFKNRKLFRQK---LGVVFQENVLDDLLTVRENLYNRASLYGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEPTTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEAKD-ADQLAVIHKGKIIAQGTPTNIR----SRFSVDKI---FFYDAKVAELQKIMKKANLPFKVSKATMRVDVITQDVEI-------------LAILNQAAGLYGSFEVIKGNLDDAFISMIKEESDD--------------------- |
| 1OXS Chain:C ((1-352)) | MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127298 for 2343 contacts (-54.3/contact) +
2D Compatibility (PS) -32249 + (NN) -3015 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 4500
Total energy: -184662.0 ( -78.81 by residue)
QMean score : 0.383
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