Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFITGNAGTVFGEWAVVEPLLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRDQVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVVE--PPSAQPVIVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKDVAPGTVVAGIPARELKKLDAKTASKTEIMQELRQL
3FS8 Chain:A ((104-225))
----------------------------------------------------------------------------------------------------RENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTNDPTPPSNELLGVTIELFAVIAARSVVLPGIHINEDALVGAGAVVTKDVPKETVVVGNPAREICSIR----------------
General information:
TITO was launched using:
RESULT:
Template:
3FS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132399 for 983 contacts (-134.7/contact) +
2D Compatibility (PS) -13905 + (NN) -6349 + (LL) 8840
1D Compatibility (HY) -7600 + (ID) 2100
Total energy: -153513.0 ( -156.17 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3FS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FS8-query.scw
PDB file :
Tito_Scwrl_3FS8.pdb
: