Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LQDLTLFLEQYKKVIDESLFKEINER--NIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVN-PLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQ--ISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSALSGHD-FDDEILLKLADLIALREN |
| 3NPK Chain:A ((5-280)) | ----------LKELFIHHLEKNL-PKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLK-DEIKIKLIKTLAFNAGL--NGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVT------------------NSFVNLLGLEQAIKTKENLLNECEQDLEKLNEKLAQMIQNLII------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72800 for 2052 contacts (-35.5/contact) +
2D Compatibility (PS) -27415 + (NN) -12161 + (LL) 2364
1D Compatibility (HY) -16800 + (ID) 4500
Total energy: -131312.0 ( -63.99 by residue)
QMean score : 0.517
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