Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDV-AQDPIPSSTLKACQDADAILLGAIGGPKWDNAPKRPEDG-LLALRKALGLFANIRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHWDESAAVDSLTYTRAEIERIIEKAFEIAATR-NKKVTSVDKANVLA-SSKLWRKIAEEVASRHPDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAGF-LTADLGGN---TTTTDFTNEVLKQIEGGE |
| 2D1C Chain:A ((19-357)) | -RKLITVIPGDGIGPECVEATLKVLEAA----KAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGY-----GEKSANVTLRKLFETYANVRPVREFPNV--PTPYA---GRGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE-VAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRY-LEEFATADLIENALLYTLEEGRVLTGDVVGYDRGAKTTEYTEAIIQNLGK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145655 for 2946 contacts (-49.4/contact) +
2D Compatibility (PS) -36227 + (NN) -14375 + (LL) 844
1D Compatibility (HY) -18800 + (ID) 5600
Total energy: -219813.0 ( -74.61 by residue)
QMean score : 0.500
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