Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKNAYAKSGVDVEAGYEVVERIKKHVARTERAGVMGALG--GFGGMFDLSQTGVKEPVLISGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGKNEPAKLEQVVAGVAEGCVQAGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVKEGDILLGLASSGIHSNGYSLVRRVFADY-TGDEVL-PELEGKQLKDVLLEPTRIYVKAALPLIKEELVNGIAHITGGGFIENVPRMFADDLAAEIDEDKVPVLPIFKALEKYGDIKHEEMFEIFNMGVGLMLAVSPENVNRVKELL---DEPVYEIGRIIKKADASVVIK |
| 2BTU Chain:A ((13-338)) | --------------EAGYEAVSRMKKHVQTTMRKEVLGGFGGMFDLSKFALE-----EPVLVSGTDGVGTKLMLAFMADKHDTIGIDAVAMCVNDIVVQGAEPLFFLDYIACGKAEPSKIENIVKGISEGCRQAGCALIGGETAEMPGMYSTEEYDLAGFTVGIVDKKKIVTGEKIEAGHVLIGLASSGIHSNGYSLVRKVLLEDGEL----IYGRLELPLGEELLKPTKIYVKPILELLKNHEVYGMAHITGGGFIENIPRMLPEGIGAEIELGSWKIQPIFSLLQEVGKLEEKEMFNIFNMGIGMVVAVKEEDAKDIVRLLEEQGETARIIGRTVQGAGVTFN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BTU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197114 for 2635 contacts (-74.8/contact) +
2D Compatibility (PS) -32896 + (NN) -6537 + (LL) 1636
1D Compatibility (HY) -33600 + (ID) 8700
Total energy: -277211.0 ( -105.20 by residue)
QMean score : 0.471
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