Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
1QF9 Chain:A ((7-192))
NVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDAN-Q-GKNFLVDGFPRNEENNNSWEENMKDF-VDTKFVLFFDCPEEVMTQRLLKRGESS----------------------GRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDVENLFKSMG
General information:
TITO was launched using:
RESULT:
Template:
1QF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64642 for 1461 contacts (-44.2/contact) +
2D Compatibility (PS) -19902 + (NN) -4999 + (LL) 788
1D Compatibility (HY) -14000 + (ID) 2850
Total energy: -105605.0 ( -72.28 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1QF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QF9-query.scw
PDB file :
Tito_Scwrl_1QF9.pdb
: