Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
3BBB Chain:A ((3-135))
LERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQ-----VGRNIIHGSDSVKSAEKEISLWFKP
General information:
TITO was launched using:
RESULT:
Template:
3BBB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68056 for 1009 contacts (-67.4/contact) +
2D Compatibility (PS) -14118 + (NN) -4921 + (LL) -268
1D Compatibility (HY) -13200 + (ID) 3500
Total energy: -104063.0 ( -103.13 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3BBB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBB-query.scw
PDB file :
Tito_Scwrl_3BBB.pdb
: