Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATKQHKKVILVGDGAVGSSYAFALVNQGIAQELGIIEIPALFDKAVGDAEDLSHALAFTS-PKKIYAA-TYADCADADLVVITAGAPQKPGETRLDLVGKNLAINKSIVTQVVESGFNGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALADKIGVDARSV-HAYIMGEHGDSEFAVWSHANVAGVQLEQWLQENRDIDEQGLVDLFISVRDAAYSIINKKGATYYGIAVALARITKAILDDENAVLPLSVYQEGQYGDVKDVFIGQPAIVGAHGIVRPVNIPLNDAELQKMQASAEQLKDIIDEAWKNPEFQEASKN |
| 2X0J Chain:A ((1-293)) | -------MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA--EDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNA---GARNIRRAWIIGEHGDSMFVAKSLADFDGEV--------------DWEAVENDVRFVAAEVIKRKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYG-IENVAVGVPAKLGKNGAE-VADIKLSDEEIEKLRNSAKILRERLEELGY---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171866 for 2586 contacts (-66.5/contact) +
2D Compatibility (PS) -31487 + (NN) -14715 + (LL) 2988
1D Compatibility (HY) -17600 + (ID) 5700
Total energy: -238380.0 ( -92.18 by residue)
QMean score : 0.523
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