Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLT-DPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVEIVLEATGFFASKEKAEQHIHENGAKKVVITAPGGNDVKTVVFNTNH-DILDGTETVISGASCTTNCLAPMAKALQDNFGVKQGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVATLEKDVTVEEVNAAMKAAA----NDSYGYTEDPIVSSDIVGISYGSLFDATQTKVQTVDGNQLVKVVSWYDNEMSYTSQLVRTLEYFAKIAK
3H9E Chain:O ((6-339))RELTVGINGFGRIGRLVLRACMEK-GVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISA-GAQRVVISAPSP-DAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSR-KAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGI---ALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSRDA


General information:
TITO was launched using:
RESULT:

Template: 3H9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126966 for 2898 contacts (-43.8/contact) +
2D Compatibility (PS) -35603 + (NN) -14451 + (LL) 136
1D Compatibility (HY) -28000 + (ID) 7200
Total energy: -212084.0 ( -73.18 by residue)
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_3H9E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H9E-query.scw
PDB file : Tito_Scwrl_3H9E.pdb: