Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSML-DTRLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGSVRTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEG-GVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKADLLRICGTDFGLTD-PSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEGLLRNTEAQTKLID-FTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRYEADRTMPPNRLNGARLPDMKLILSDGNSERLYSFLQNGTFVLLSLRQEADDH-I--EVKGLRTVTASLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCSEVIQKGISRWFSVTSRV
4K5S Chain:A ((13-510))-ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQGLDFGLVDTRHPYTALVPQSRTEALLAEHAREAGAEIRRGHEVTGLRQDAEAVEVTVAGP-SGPYRVRARYAVGCDGGRSTVRRLAGIGFPGTEATVRALIGYVTTPEREVPR-RWERTPDGILVLAFPPEGGLGRVVVIEYT------EGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELLGTDEVNRYFTGMITGTDVRYATFAP-RPHPWAGRFAGGLVLSGPSGEPVPVAELLRSARPLLLDLAGRADLREATRPWSDRVSVVA--G-EATVEPPAQALLVRPDGYVAWAGSPAAT-ADELRA-SLARWFGP----


General information:
TITO was launched using:
RESULT:

Template: 4K5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2879 -254552 -88.42 -530.32
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -88.42
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_4K5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K5S-query.scw
PDB file : Tito_Scwrl_4K5S.pdb: