Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYLHDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHT-SSLSETQQLVEQEGRIFTSFTLDMSKPEAIKDSAAELFE-NRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKR-GHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGWLSR
4G81 Chain:D ((3-253))-----ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWLA-


General information:
TITO was launched using:
RESULT:

Template: 4G81.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1335 -30123 -22.56 -121.46
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain D : 0.81

3D Compatibility (PKB) : -22.56
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.599

(partial model without unconserved sides chains):
PDB file : Tito_4G81.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G81-query.scw
PDB file : Tito_Scwrl_4G81.pdb: