Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILVLAVHPHM---ETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANHYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQPFV
3HA2 Chain:A ((1-167))MQTLIIVAHPELARSNTQPFFKAAIENFS---NVTWHPLVA-----DFNVEQEQSLLLQNDRIILEFPLYWYSAPALLKQWMDTVMTTKFATGH-QYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAYQQYATNV--


General information:
TITO was launched using:
RESULT:

Template: 3HA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 714 -64188 -89.90 -391.39
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -89.90
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_3HA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HA2-query.scw
PDB file : Tito_Scwrl_3HA2.pdb: