Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG
4EO9 Chain:A ((26-262))
--NTATLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAITTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPPPIEKGSEFSQDADPRYTDIGGGPLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGNSLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPVVPGGTYLDPEAAAAV----------
General information:
TITO was launched using:
RESULT:
Template:
4EO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96082 for 1985 contacts (-48.4/contact) +
2D Compatibility (PS) -25803 + (NN) -16694 + (LL) 824
1D Compatibility (HY) -30000 + (ID) 10500
Total energy: -178255.0 ( -89.80 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_4EO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EO9-query.scw
PDB file :
Tito_Scwrl_4EO9.pdb
: