Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLMPHSAALNAARRSADLTALADGGALDVIVIGGGITGVGIALDAATRGLTVALVEKH-DLAFGTSRWSSKLVHGGLRYLAS-GNVGIARRSAVERGILMTRNAPHLVHAMPQLVPLLPSMGHTKRALVRAGFL-AGDALRVLAGTPAATLPRSRRIPASRVVEIAPTVRRDGLDGGLLAYDGQLIDDARLVMAVARTAAQHGARILTYVGASNVTGT---SVELTDRRTRQSFALSARAVINAAGVWAGEIDPS---------LRLRPSRGTHLVFDAKSFANPTAALTIPIPGELNRFVFAMPEQLGRIYLGLTDEDAPGPIPDVPQPSSEEITFLLDTVNTALGTAVGTKDVIGAYAGLRPLIDTGGAGVQGRTADVSRDHAVFESPSGVISVVGG---KLTEYRYMAEDVLNRAITLRHLRAAKCRTRNLPLIGAPANPGPAPGSGAGLPESLVARYGAEAANVAAAATCERPTEPVADGIDVTRAEFEYAVTHEGALDVDDILDRRTRIGLVPRDRERVVAVAKEFLSR |
3DME Chain:A ((3-368)) | ------------------------TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYC-AARGVPHQRLGKLIVATS----------DAEASQLDSIARRAGA---NGVDDLQHIDGAAARRLEPALH---CTAALVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFG-GAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGRAPF--S-RLIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWIAT---EDYTLDPRRADVFYAAVRSYW-PALPDGALAPGYTGIRPKISGPHEPAADFA-IAGPAS---HGVAGLVNLYGIESPGLTASLAIAEETLARLA------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197802 for 3059 contacts (-64.7/contact) +
2D Compatibility (PS) -36762 + (NN) -8384 + (LL) 10140
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -244608.0 ( -79.96 by residue)
QMean score : 0.381
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