Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNILISGAASGIGAASARLFHRRGWRVGLLDIDAEALRGLAAQL----PGAWHRAVDVSEPDAVGEALAQFCA-DGRLRLLFNCAGVLRFGRFEEVALEDHARLLAINLHGVLNCCHAAFPFLRATPQAQVLNMGSASGLYGVPEMAVYSASKFAVRGLTEALELEWRRHGIRVADLMPPFVRTPMVAGQAYQP--PV---LRRLGLRLDAEDIAEAAWRHAHSRRVHRPVGGLFTALYWAGQLSPPWVNRAVMAWLSRG |
| 3GAF Chain:A ((11-239)) | DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161687 for 1822 contacts (-88.7/contact) +
2D Compatibility (PS) -23245 + (NN) -8697 + (LL) 840
1D Compatibility (HY) -6400 + (ID) 2800
Total energy: -201989.0 ( -110.86 by residue)
QMean score : 0.493
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