Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLFSAVEMAPRDPILGLNEAFNADTRPGKINLGVGVYYNEEGRIPLLRAVQAAEKARIEAHAPRGYLPIEGIAAYDQGVQKLLFGNESELLAAG-RVVTTQAVGGTGALKLGADFLKRLL-PDATVAISDPSWENHRALFEAAGFPVQNYRYYDAASNGVNRAGLLEDLNAL-PARSIVVLHACCHNPTGVDLELDDWKQVLDVLKAKGHVPFLDIAYQGFGNGIEE-DAAAVRLFAQSGLSFFVSSSFSKSFSLYGERVGALSIVTESRDESARVLSQVKRVIRTNYSNPPTHGASVVSSVLNSPELRALWEQELGEMRDRIRDMRLAMVEQLAAHG----AKRDFSFVGRQRGMFSYSGLTADQVERLKTEFGIYAVSTGRICVAALNKSNLETITKAIVQVL |
| 3K7Y Chain:A ((3-402)) | -KLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKLVTENYKEKPYLLGNGTEDFSTLTQNLIFG-NNSKYIEDKKICTIQCIGGTGAIFVLLEFLK--MLNVETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQ-ISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHLK-THHIYIINNGRINVSGITKNNVDYIADKICLSL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -203482 for 3199 contacts (-63.6/contact) +
2D Compatibility (PS) -43577 + (NN) -27550 + (LL) 500
1D Compatibility (HY) -37200 + (ID) 6350
Total energy: -317659.0 ( -99.30 by residue)
QMean score : 0.549
|
|
|