Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQS-VALLQRLQVKTVVSFIKDDDRAW-------LGQAPVRVLSLPTHADR--VDDAEVLSVLRQLQAAE-REGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
3RGO Chain:A ((2-147))
------------------------------------------------YHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIR-PSQLEVLKEFH----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73302 for 1063 contacts (-69.0/contact) +
2D Compatibility (PS) -14971 + (NN) -10864 + (LL) 6516
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -101171.0 ( -95.17 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3RGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RGO-query.scw
PDB file :
Tito_Scwrl_3RGO.pdb
: