Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDVIISGGGLLGLITAVGLSNNSVSVAVIEKNNLPRIIDDNRAFAISQGS-RKILEKLGIWQFIESEAEPIL-DICILD-ENSPI-TVHYNHKMVSEEPMGYVINSTVIWNAINNNFLNKLNIYSL--HSYRTITCDAG-YVEVTLG--NNQ--KLISSLLICAEGKNSKLPGLFSMSIIKFDYKQSSIVFNVKHE--LHHQ--NLAVEQFFPGGPFAILPMKSGYTSSIVWTEKSEISKMLMNLSEEEFIIELKKRFGSYLGE-V---KLDGE--RKSYPLSF---ASAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMAVENSKFLKKRFIRHAMGFV |
| 3E1T Chain:A ((6-361)) | EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF--PR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSD-TLTSVGAVVSREAAEAIKDGHEAALLRYIDR-CPI-IKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMS--EQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYFWSARKIINTEERANEAFVRLIAGRSNLDE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212562 for 2826 contacts (-75.2/contact) +
2D Compatibility (PS) -34829 + (NN) 1339 + (LL) 100
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -256352.0 ( -90.71 by residue)
QMean score : 0.415
|
|
|