Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPGNIELN--SNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPIH-----GEYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTS---------KKHVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY |
| 2J27 Chain:A ((4-250)) | PQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAI-AKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPE-FVDIIKATQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131725 for 1953 contacts (-67.4/contact) +
2D Compatibility (PS) -24827 + (NN) -7370 + (LL) 492
1D Compatibility (HY) -12800 + (ID) 4050
Total energy: -180280.0 ( -92.31 by residue)
QMean score : 0.422
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