Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFITVTLALGMIATTGATVTSNEVSAAEKDKLPATQKAKEMQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKSAVYTITWKDGSKKEVDLK--------KD---SYTANLFDSNSIKQIDINVKTK
1ET9 Chain:A ((100-204))
---------------------------------------------IKVPVNVWDKSKQQ--PPMFITVNKPKVTAQEVDIKVRKLLIKKYDIYNNREQKYSKGTVTLDLNSGKDIVFDLYYFGNGDFNSMLKIYSNNERIDSTQF-HVDVSIS--
General information:
TITO was launched using:
RESULT:
Template:
1ET9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28950 for 619 contacts (-46.8/contact) +
2D Compatibility (PS) -9758 + (NN) 893 + (LL) 4140
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -39125.0 ( -63.21 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1ET9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ET9-query.scw
PDB file :
Tito_Scwrl_1ET9.pdb
: