Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFG-PKKFKLPVVPANMQTVMNEKLAKWFAENDYFYIMHRFDE-----EARIP-----FIKHMQNSGLFASIS--------------V--GVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAA---RKPLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASE--FQK---GEHKNVEGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTV-DYVIVRNSIFNGDRD |
| 2CU0 Chain:A ((13-468)) | -KGYTFDDVLLIPQATEVE-PKDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAE---------------KYKNAVRDENGELLVAAAVSPFDIKRAIELDKAG--VDVIVVDTAHAHNLKAIKSMKEMRQKVD-ADFIVGNIANPKAVDDL--TFADAVKVGIGPGSICTTRIVAGVGVP--QITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKYMKTRKFVPEGVEGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118723 for 2655 contacts (-44.7/contact) +
2D Compatibility (PS) -32618 + (NN) -10730 + (LL) 1508
1D Compatibility (HY) -20000 + (ID) 4700
Total energy: -185263.0 ( -69.78 by residue)
QMean score : 0.410
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