Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYFVT----------------------------------SNFGAYRETSAQIMSIFRSYTDKVEPMSLDEAYLDITELVRP--------------------------------------------------DLP--------------------ASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKPDGLTVIDYQNVHDILM--TLDIGDFPGVGKASKKVMHD-------NGIFNGRDLYEKTEFELIRLFGK------------------RGRGLYNKARGIDHSEVKSSRVRKSVGTERTFA-TDVNDDEEILRKVWELSGKTAERLNKLQK------SAKTVTVKIKTYQFETLSKQMSLRDSV--SSEEDIYNIAYLLYNDLK------DPDVPIRLIGVTVGNLEQSTYKNMTIYDFI |
| 3MFI Chain:A ((29-517)) | -SLACIAHIDMNAFFAQVEQMRCGLSKEDPVVCVQ----WNSIIAVSYAARKYGISRMDTIQEALKKCSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALAIFKWACDLVERASIDEVFLDLGRICFNMLMFDNEYELTGDLKLKDALSNIREAFIGGNYDINSHLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVILALGSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQTIVKNDCLLDFLDCGKFEITSFWTLGGVLGKELIDVLDLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSDYDSNIDPLKTADLAEKLFKLSRGRYGLPLSSRPVVKSMMSNKNLRGKSCNSIVDCISWLEVFCAELTSRIQDLEQEYNKIVIPRTVSISLKTKSYEVYRKSGPVAYKGINFQSHELLKVGIKFVTDLDIKGKNKSYY-PLTKLSMTITNFDIID---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126218 for 2656 contacts (-47.5/contact) +
2D Compatibility (PS) -37074 + (NN) -18521 + (LL) 1444
1D Compatibility (HY) -20800 + (ID) 4350
Total energy: -205519.0 ( -77.38 by residue)
QMean score : 0.430
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